CDS

Accession Number TCMCG016C26818
gbkey CDS
Protein Id OMO53725.1
Location join(84103..84312,84556..84687,84767..84873,85042..85148,85250..85347,85489..85668,85754..85975,86394..86528,86603..86885,86975..87048,87122..87342,87427..87514,87594..87687,87780..87968,88081..88112,88224..88300,88390..88479,88558..88627,88741..88795,88881..88939,89017..89182,89306..89484,89571..89786,90008..90109,90195..90212)
Organism Corchorus capsularis
locus_tag CCACVL1_28417

Protein

Length 1067aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01015144.1
Definition SNF2-related protein [Corchorus capsularis]
Locus_tag CCACVL1_28417

EGGNOG-MAPPER Annotation

COG_category K
Description chromatin-remodeling complex ATPase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11654        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006323        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006333        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009561        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016584        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031497        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034728        [VIEW IN EMBL-EBI]
GO:0040034        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048506        [VIEW IN EMBL-EBI]
GO:0048509        [VIEW IN EMBL-EBI]
GO:0048510        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071824        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0080135        [VIEW IN EMBL-EBI]
GO:1900034        [VIEW IN EMBL-EBI]
GO:1900036        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGAAATCGTCCAAGGCTCCGGTGTCGTCCGATGATGCGCTATCCAACGGCTCCAATTCGTCAGAAGAGGAGCGAATTAACGACCAGATCAACGGCGGGGAAGAAGAAGAAGACGAGGAAGAGCTCGAAGCCGTTGCTCGTTCTACCGCTGCCTCAGACGAAGACGATGACGCTGCCCCTGATGAGAACGGCGACGACGCTGACGAGGACGAGTCTACTGGGGCTGACCCAGAAATTAGCAAGCGAGAAAAGGAAAGGCTAAAAGAAATGCAGAAACTAAAGAAGCAGAAGATTCAGGAAATACTGGATACTCAAAATGCTGCCATTGATGCTGATATGAATAATAGGGGAAAGGGACGATTAAAGTACCTTTTGCAACAAACGGAGTTATTTGCTCATTTTGCCAAAGGTGACCCTTCATCATCACAAAAGAAGGTGAAAGGAAGGGGCCGCCATGCATCAAAAGTAACTGAAGAGGAAGAAGATGAAGAGTGTCTCAAGGAGGAAGAGGATGGTTTGGCTGGAAACACCCGATTGCTGACTCAGCCTTCTTGTATTCAGGGAAAGATGAGGGACTACCAACTTGCTGGTTTAAACTGGCTTATACGACTTTATGAGAATGGTATAAATGGAATTCTTGCAGATGAAATGGGACTGGGTAAAACTTTGCAAACTATATCCTTAATGGGTTATCTGCATGAGTACCGAGGGATTACTGGCCCTCATATGGTTGTTGCTCCAAAATCAACTCTTGGTAATTGGATGAATGAAATACGTCGATTTTGCCCAGTCTTGCGAGCTGTAAAGTTTCTTGGGAATCCTGAAGAAAGAAGATACATCCGTGAGGAGTTACTTGTTGCTGGGAAGTTTGATGTCTGTGTCACAAGTTTTGAGATGGCTATCAAGGAGAAGTCTGCCCTGCGTCGTTTTAGTTGGCGCTATATAATTATTGATGAAGCCCATCGAATCAAGAATGAGAATTCCCTTCTTTCAAAAACTATGAGGATCTACAATACTAATTACCGTCTTCTCATTACCGGTACTCCACTTCAGAATAATCTCCATGAGCTATGGTCTCTTCTTAACTTTTTGCTGCCAGAGATTTTTAGTTCTGCCGAAACTTTTGATGAGTGGTTTCAGATTTCTGGTGAAAATGACCAGCAGGAAGTTGTTCAACAACTTCACAAGGTTCTTCGGCCATTTCTCCTTCGGAGATTGAAATCAGATGTTGAGAAAGGTTTGCCTCCCAAAAAGGAAACTATCCTGAAAGTAGGAATGTCCCAGATGCAGAAACAGTATTATAGAGCTTTGCTGCAAAAAGATCTTGAGGTTGTTAATGCCGGTGGAGAGCGTAAGCGTCTTCTAAACATTGCAATGCAGCTGCGTAAATGCTGTAATCACCCATATCTTTTCCAAGGTGCTGAACCTGGACCTCCGTATACTACAGGAGATCATCTTATAACCAATGCTGGAAAAATGGTTCTCTTGGACAAGTTACTTCCAAAGCTGAAGGAGCGTGATTCAAGAGTTCTGATATTTTCACAGATGACAAGGCTGCTGGATATTCTTGAAGATTATTTGATGTTCCGTGGGTACCTGTATTGCCGTATTGATGGTAATACAGGTGGAGAAGATCGTGATGCTTCCATTGAAGCCTTCAACAAGCCGGGAAGTGAAAAATTTGTTTTCTTATTATCAACTAGAGCTGGAGGCCTTGGTATAAATCTTGCTACTGCAGATGTTGTCATTCTTTATGATAGTGACTGGAACCCACAAGTTGATCTTCAAGCACAGGATCGTGCTCACAGGATTGGTCAAAAGAAGGAAGTTCAAGTGTTCCGCTTTTGCACTGAGTACACTATTGAGGAAAAGGTGATTGAAAGGGCTTATAAAAAGCTTGCGTTAGATGCTCTGGTTATTCAACAAGGGCGACTTGCAGAGCAGAAAACTGTTAACAAAGATGAATTGCTTCAGATGGTGAGGTTTGGTGCTGAAATGGTATTCAGTTCCAAGGATAGCACGATCACAGATGAAGACATTGATAGAATCATTGCCAAGGGAGAAGCAGCAACAGCTGAACTTGATGCTAAGATGAAAAAATTTACAGAGGATGCCATTAAATTTAAGATGGATGATACTGCTGAGCTGTATGATTTTGATGATGACAAGGATGAGAACAAGTTTGACTTCAAGAAAATTGTAAGCGAAAACTGGATTGAACCACCAAAGAGAGAGCGGAAGCGGAATTACTCGGAATCTGAGTACTTTAAACAAACCATGCGCCAAGGTGGTCCTGCAAAACCGAAGGAGCCTCGGATTCCTCGCATGCCTCAACTGCATGATTTCCAGTTTTTCAACACTCAGAGGTTGAGTGAGTTGTATGAGAAAGAAGTACGCTATCTCATGCAAGCACATCAGAAGAATCAGGTAAAGGATGCAATTGAAGTGGATGAACCTGAAGAAGGGGGAGATCCATTAACTGCTGAAGAGTTGGAAGAAAAGGAGCGACTATTGGAAGAGGGATTTTCCTCATGGAGTAGAAGAGATTTCAATACATTCATCAGAGCTTGTGAGAAGTATGGACGAAATGATATAAAGAGTATTGCTTCTGAAATGGAAGGGAAAACCGAGGAGGAAGTTGAAAGATATGCAAAAGTTTTTAAAGAACGATATAAAGAGTTGAATGATTATGATAGGATCATTAAGAACATTGAAAGAGGAGAAGCCAGAATTTCTAGAAAAGATGAGATCATGAAAGCAATTGGCAAGAAATTGGATCGGTACAAGAATCCTTGGCTGGAAATGAAGATCCAGTATGGTCAAAACAAAGGGAAGCTGTACAATGAAGAATGTGATCGGTTCATGATATGCATGGTCCACAAGCTTGGTTATGGGAACTGGGAGGAGTTGAAGGCAGCATTCCGTACATCACCCTTGTTTCGATTTGACTGGTTTGTGAAGTCACGAACAACTCAAGAGCTGGCAAGGAGATGCGATACCCTCATTCGATTGGTTGAGAAGGAAAACCAAGAATATGATGAAAGGGAGCGACAAGCCCGCAAAGAGAAGAAACTCGCTAAGAATATGACACCAACAAAGCGTGGTGGGAGGCAGCCAACTGAGAGTCCTAATCAATTAAAGAAACGAAAGCAGCTATCGATGGATGATTATGTGACGACCTCGGGAAAAAAGAGGAAGTGA
Protein:  
MAKSSKAPVSSDDALSNGSNSSEEERINDQINGGEEEEDEEELEAVARSTAASDEDDDAAPDENGDDADEDESTGADPEISKREKERLKEMQKLKKQKIQEILDTQNAAIDADMNNRGKGRLKYLLQQTELFAHFAKGDPSSSQKKVKGRGRHASKVTEEEEDEECLKEEEDGLAGNTRLLTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLHEYRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRYIREELLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEAATAELDAKMKKFTEDAIKFKMDDTAELYDFDDDKDENKFDFKKIVSENWIEPPKRERKRNYSESEYFKQTMRQGGPAKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQAHQKNQVKDAIEVDEPEEGGDPLTAEELEEKERLLEEGFSSWSRRDFNTFIRACEKYGRNDIKSIASEMEGKTEEEVERYAKVFKERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLEMKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWEELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDERERQARKEKKLAKNMTPTKRGGRQPTESPNQLKKRKQLSMDDYVTTSGKKRK